Hello Jochen, all,
Thanks. I'll experiment with the IO library when I receive another
round of machine time allocation.
Success stories on JURECA or JUSUF encourage us a lot.
Itaru.
On Wed, Oct 14, 2020 at 5:31 PM Jochen Martin Eppler
<j.eppler(a)fz-juelich.de> wrote:
>
> [Re-sending with rendered Markdown]
>
> Dear Itaru,
>
> the backend infrastructure is in the kernel and thus independent of the user
interface you are using. In SLI you can query the list of available recording backends
using
>
> GetKernelStatus /recording_backends get info
>
> and set the backend for a given recorder recorder using
>
> recorder << /record_to /<backend_name> >> SetStatus
>
> I just realized that I posted the link to my personal build of the documentation,
which has not been updated in a while. The official and current version is actually here:
>
>
https://nest-simulator.readthedocs.io/en/latest/guides/recording_from_simul…
>
> Cheers,
> Jochen!
>
> On 13.10.20 02:59, Itaru Kitayama wrote:
>
> Jochen,
> Is it usable from the SLI interface? I've been running NEST on Fugaku using SLI.
>
> On Mon, Oct 12, 2020 at 8:27 PM Jochen Martin Eppler
> <j.eppler(a)fz-juelich.de> wrote:
>
> Dear Itaru,
>
> we have created the new I/O infrastructure (and the SIONlib backend in particular) to
address exactly the problem you describe. It is available in NEST master since quite some
time and the user-level documentation can be found here:
>
>
https://nest-simulator-jougs.readthedocs.io/en/latest/from_cpp/recording_ba…
>
> In order to enable it, you first install SIONlib (see this script for an example on
how to do that) and then pass the path to NEST’s CMake using the
--Dwith-sionlib=<path>.
>
> Once everything is installed, you can just set the record_to property of any
recording device to sionlib to let it write to SIONlib binary files. A minimal reader for
the files can be found here:
https://github.com/nest/nest-sionlib-reader
>
> Please let me know of any problems you run into. As this is quite new and has not
been tested extensively in the wild, there might still be some glitches.
>
> Cheers,
> Jochen!
>
> On 09.10.20 08:55, Itaru Kitayama wrote:
>
> Hi,
> Has anyone explored the external library support? I am on Fugaku and
> the jobs can create casually tens of thousands of files in a single directory;
> this aborts jobs.
>
> Itaru.
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> --
> Dr. Jochen Martin Eppler
> Phone: +49(2461)61-96653
> ----------------------------------
> Simulation Laboratory Neuroscience
> Jülich Supercomputing Centre
> Institute for Advanced Simulation
>
>
>
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>
> --
> Dr. Jochen Martin Eppler
> Phone: +49(2461)61-96653
> ----------------------------------
> Simulation Laboratory Neuroscience
> Jülich Supercomputing Centre
> Institute for Advanced Simulation
>
> _______________________________________________
> NEST Users mailing list -- users(a)nest-simulator.org
> To unsubscribe send an email to users-leave(a)nest-simulator.org