Hello everyone,
Is it possible to include a *spatiotemporal poisson generator* in the simulation? I am trying to apply a current to a population of neurons which is something like this?
[image: Selection_001.png] where `i` is the index of the neuron and `t` is the current time of the simulation.
Thank you for any guidance. best,
Dear Abolfazl,
With current master it is possible to use the index of the neuron in a mathematical expression when specifying the rate (see our documentation on parametrizationhttps://nest-simulator.readthedocs.io/en/latest/guides/nest2_to_nest3/nest2_to_nest3_overview.html#parametrization). It is currently not possible to include the current time `t` however.
Using parametrization to get the rate to depend on the global id is not straight forward however, because you will need to create one poisson generator per neuron, each with a rate depending on the individual neuron. Another problem is that nest.poisson_generator does not accept negative rates. And, as it is not possible to use the current time, you would be better off creating a new poisson model where you can define your rate. The best way to do so it to use NESTML (https://nestml.readthedocs.io/en/latest/). Both the index id and current time should be available on this level. I have added our NESTML expert Charl in CC.
Best wishes, Stine
________________________________ Fra: Abolfazl Ziaeemehr a.ziaeemehr@gmail.com Sendt: lørdag 26. desember 2020 12:16 Til: NEST User Mailing List users@nest-simulator.org Emne: [NEST Users] spatiotemporal Poisson generator
Hello everyone,
Is it possible to include a spatiotemporal poisson generator in the simulation? I am trying to apply a current to a population of neurons which is something like this?
[Selection_001.png] where `i` is the index of the neuron and `t` is the current time of the simulation.
Thank you for any guidance. best,
--
Abolfazl Ziaeemehr PhD in Computational Neuroscience Institute for Advanced Studies in Basic Sciences (IASBS) Page: iasbs.ac.ir/~a.ziaeemehrhttp://iasbs.ac.ir/~a.ziaeemehr https://github.com/Ziaeemehr