Hi
Please could someone suggest the most likely reason why current NEST (v2.16.0) appears to install ok (tutorials tested work) but fails during make installcheck for pynest tests:
$ make installcheck ...
Phase 7: Running PyNEST tests. ------------------------------
Using nosetests.
[cajal:07463] Failing at address: 0x44000099 [cajal:07463] *** End of error message *** Segmentation fault (core dumped)
PyNEST tests: Passed: 0 Skipped: 0 Failed: 0 /home/julianb/Documents/NEST/share/nest/extras/do_tests.sh: 790: /home/julianb/Documents/NEST/share/nest/extras/do_tests.sh: arithmetic expression: expecting primary: " 363 + " CMakeFiles/installcheck.dir/build.make:57: recipe for target 'CMakeFiles/installcheck' failed make[3]: *** [CMakeFiles/installcheck] Error 2 CMakeFiles/Makefile2:99: recipe for target 'CMakeFiles/installcheck.dir/all' failed make[2]: *** [CMakeFiles/installcheck.dir/all] Error 2 CMakeFiles/Makefile2:106: recipe for target 'CMakeFiles/installcheck.dir/rule' failed make[1]: *** [CMakeFiles/installcheck.dir/rule] Error 2 Makefile:208: recipe for target 'installcheck' failed make: *** [installcheck] Error 2 $
Current setup: ubuntu 16.04, python 2.7.12, and nose 1.3.7.
Thanks.
Dear Julian,
we have never observed this kind of behavior. A segfault is not something you should ever get.
Could you please update to 2.18.0 and check if the problem persists?
Best regards, Jochen!
On 19.08.19 22:20, Julian Martin Leslie Budd wrote:
Hi
Please could someone suggest the most likely reason why current NEST (v2.16.0) appears to install ok (tutorials tested work) but fails during make installcheck for pynest tests:
$ make installcheck ...
Phase 7: Running PyNEST tests.
Using nosetests.
[cajal:07463] Failing at address: 0x44000099 [cajal:07463] *** End of error message *** Segmentation fault (core dumped)
PyNEST tests: Passed: 0 Skipped: 0 Failed: 0 /home/julianb/Documents/NEST/share/nest/extras/do_tests.sh: 790: /home/julianb/Documents/NEST/share/nest/extras/do_tests.sh: arithmetic expression: expecting primary: " 363 + " CMakeFiles/installcheck.dir/build.make:57: recipe for target 'CMakeFiles/installcheck' failed make[3]: *** [CMakeFiles/installcheck] Error 2 CMakeFiles/Makefile2:99: recipe for target 'CMakeFiles/installcheck.dir/all' failed make[2]: *** [CMakeFiles/installcheck.dir/all] Error 2 CMakeFiles/Makefile2:106: recipe for target 'CMakeFiles/installcheck.dir/rule' failed make[1]: *** [CMakeFiles/installcheck.dir/rule] Error 2 Makefile:208: recipe for target 'installcheck' failed make: *** [installcheck] Error 2 $
Current setup: ubuntu 16.04, python 2.7.12, and nose 1.3.7.
Thanks.
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-- Dr. Jochen Martin Eppler Phone: +49(2461)61-96653 ---------------------------------- Simulation Laboratory Neuroscience Jülich Supercomputing Centre Institute for Advanced Simulation
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