_______________________________________________Hello all,Thank you for filling in the date picker. Let's meet this Wednesday (22nd) at 14:00 Jülich time.We can meet here: https://webconf.fz-juelich.de/b/lin-dfx-nsx-j4yLooking forward!CharlOn Thu, Mar 16, 2023, at 10:58, Charl Linssen wrote:Dear Razvan, dear Beck,Thanks to you both for the expression of interest. If you don't mind, shall we have a meeting with all three of us, and allow anyone to join who might also be interested in the topic?Could you please fill in the date picker here: https://terminplaner6.dfn.de/p/c0006005efa01c5d2381ebac469d0ba4-171366As a bit of background reading (although I'm sure you already found this), here is the paper detailing the NEST implementation of gap junctions: https://www.frontiersin.org/articles/10.3389/fninf.2015.00022/fullYours,CharlOn Thu, Mar 16, 2023, at 02:02, Razvan Gamanut wrote:Hello Charl and Beck,I would be interested to join the discussion, as I am currently trying to implement gap junctions too in an AdEx model with NESTML. Since maybe I'm not the only one interested, could you post the meeting time and the zoom details?Best regards,RazvanOn Thu, 16 Mar 2023 at 01:28, Beck Strohmer <bstrohmer@gmail.com> wrote:Hi Charl,Yes, I would greatly appreciate a deeper dive into this with you. Can you write to me directly at bstrohmer@gmail.com so we can find a suitable time? Thanks so much!Best,BeckOn Wed, Mar 15, 2023 at 3:07 PM Charl Linssen <nest-users@turingbirds.com> wrote:Hi, thanks very much for your inquiry!To add a gap junction to a NESTML model, a few modifications to the toolchain would be required. A first idea would be to add a new input port with a type of "gap". If a gap junction port is present, we could then generate the handler for a GapJunctionEvent, as well as to generate the necessary code for the waveform relaxation mechanism in the update() method of the neuron.If you'd like to do a deeper dive into this together, I would be happy to have a video call this week or the next (after that I will be in Marseille for the HBP Summit). Please let me know what options would work best for you.Yours,CharlOn Tue, Mar 14, 2023, at 11:10, bstrohmer@gmail.com wrote:> Hi everyone, has anyone successfully added a gap junction to an> existing model using NESTML? I would like to add gap junction support> to the aeif_cond_alpha neuron model but it is unclear how this can be> done within NESTML. As suggested by Charl, I started to look into> updating the jinja templates but I am not sure this will be possible> since both the input/output of the neuron and the model's equation must> be updated to support gap junctions. If anyone has any suggestions or> if anyone has NESTML code for adding a gap junction to an existing> model, I would be very appreciative. Thanks!> _______________________________________________> NEST Users mailing list -- users@nest-simulator.org> To unsubscribe send an email to users-leave@nest-simulator.org_______________________________________________NEST Users mailing list -- users@nest-simulator.orgTo unsubscribe send an email to users-leave@nest-simulator.org_______________________________________________NEST Users mailing list -- users@nest-simulator.orgTo unsubscribe send an email to users-leave@nest-simulator.org_______________________________________________NEST Users mailing list -- users@nest-simulator.orgTo unsubscribe send an email to users-leave@nest-simulator.org_______________________________________________NEST Users mailing list -- users@nest-simulator.orgTo unsubscribe send an email to users-leave@nest-simulator.org
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