# -*- coding: utf-8 -*-
#
# test_conn_builder.py
#
# This file is part of NEST.
#
# Copyright (C) 2004 The NEST Initiative
#
# NEST is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 2 of the License, or
# (at your option) any later version.
#
# NEST is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with NEST. If not, see <http://www.gnu.org/licenses/>.
import nest
import unittest
__author__ = 'naveau'
[docs]class TestSPBuilder(unittest.TestCase):
[docs] def setUp(self):
nest.ResetKernel()
[docs] def test_synapse_initialisation_one_to_one(self):
syn_model = 'static_synapse'
syn_dict = {'model': syn_model, 'pre_synaptic_element': 'SE1',
'post_synaptic_element': 'SE2'}
neurons = nest.Create('iaf_psc_alpha', 2, {
'synaptic_elements': {
'SE1': {'z': 0.0, 'growth_rate': 0.0},
'SE2': {'z': 0.0, 'growth_rate': 0.0}
}
})
nest.Connect(neurons, neurons, "one_to_one", syn_dict)
status_list = nest.GetStatus(neurons, 'synaptic_elements')
for status in status_list:
self.assertEqual(1, status['SE1']['z_connected'])
self.assertEqual(1, status['SE2']['z_connected'])
[docs] def test_synapse_initialisation_all_to_all(self):
syn_model = 'static_synapse'
syn_dict = {'model': syn_model, 'pre_synaptic_element': 'SE1',
'post_synaptic_element': 'SE2'}
neurons = nest.Create('iaf_psc_alpha', 2, {
'synaptic_elements': {
'SE1': {'z': 0.0, 'growth_rate': 0.0},
'SE2': {'z': 0.0, 'growth_rate': 0.0}
}
})
nest.Connect(neurons, neurons, "all_to_all", syn_dict)
status_list = nest.GetStatus(neurons, 'synaptic_elements')
for status in status_list:
self.assertEqual(2, status['SE1']['z_connected'])
self.assertEqual(2, status['SE2']['z_connected'])
[docs] def test_not_implemented_rules(self):
syn_model = 'static_synapse'
syn_dict = {'model': syn_model, 'pre_synaptic_element': 'SE1',
'post_synaptic_element': 'SE2'}
neurons = nest.Create('iaf_psc_alpha', 2, {
'synaptic_elements': {
'SE1': {'z': 0.0, 'growth_rate': 0.0},
'SE2': {'z': 0.0, 'growth_rate': 0.0}
}
})
for conn_dict in [
{'rule': 'fixed_indegree', 'indegree': 1},
{'rule': 'fixed_outdegree', 'outdegree': 1},
{'rule': 'fixed_total_number', 'N': 1},
{'rule': 'pairwise_bernoulli', 'p': 0.5},
]:
try:
nest.Connect(neurons, neurons, conn_dict, syn_dict)
except nest.NESTError as e:
self.assertRegexpMatches(
str(e), 'This connection rule is not implemented ' +
'for structural plasticity'
)
[docs]def suite():
test_suite = unittest.makeSuite(TestSPBuilder, 'test')
return test_suite
if __name__ == '__main__':
unittest.main()
